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Table 1 Primer sequences used for the RQ-PCR analysis

From: Fish biomarkers from a different perspective: evidence of adaptive strategy of Abramis brama (L.) to chemical stress

Gene

Primer sequence (5′–3′)

Published in

Primer efficiency

Endogenous control

 40s11

F:CCGTGGGTGACATCGTTACA

R:TCAGGACATTGAACCTCACTGTCT

[30]a

2.05

General stress

 hsp70

F:GGCAGAAAGTTTGATGACCCA

R:GCAATCTCCTTCATCTTCACC

[31]a

2.09

 cox1

F:GGAACTTAGCCCACGCA

R: AAGCACGGATCAGACGA

[31]a

1.92

 erk2

F:GTTGAAGACGCAGCACTTGA

R:ACAGGTTTGATGGCTTCAGG

[32]b

2.00

 cr

F:GTGAGACTGCAAGTGTCCAA

R: TCTCTCTTCACTATGGCCT

[31]a

1.97

Antioxidative defence

 sod

F:GAGTTCGACAACACAATCTATGCCAC

R: CAGCCTTGACTGAGGTCTCC

[33]c

2.01

 gpx1

F:AGATGTCATTCCTGCACACG

R:AAGGAGAAGCTTCCTCAGCC

[34]b

2.07

 nrf2a

F:GAGCGGGAGAAATCACACAGAATG

R:CAGGAGCTGCATGCACTCATCG

[35]b

1.96

Xenobiotic metabolism

 cyp1a

F: TTCGGAGCCGGTTTCGACAC

R: CCTCGAGGAGCGGCAGG

[33]c

1.98

 mgst3a

F:GATATGTGGCGCTAACCGGA

R:ACTGTACATTGTTGGATACGG

[36]b

2.00

Endocrine disruption

 erα

F:ACTGCCCACAAACTCTCACC

R:TGGGAACTCATAGGCTCCAT

[30]a

2.05

 erβ

F:CCAGGTCCATTTGTTGGAGT

R:TGAGGTCTGGGGAGAAAATG

[30]a

2.04

Glucose homeostasis

 pc

F: GTAAAGGTGAAGCCAGGCCAG

R: TCCCCTTCCAGGCTGCTGTC

[33]c

2.01

 pygl

F: TGGCCAATCACAGGATCGTTA

R: TTCTCAATTGCCTCCACGTCA

[33]c

2.02

Iron homeostasis

 tfd

F: GGCACACTGGCAAGTTTACAT

R: GGCTTTCAGGTGTCTTGCAG

[33]c

2.09

Neurotoxicity

 mbp

F: AATCAGCAGGTTCTTCGGAGGAGA

R: AAGAAATGCACGACAGGGTTGACG

[37]b

1.91

  1. aCyprinus carpio-, bDanio rerio- and cRutilus rutilus-specific sequences