Table 1 Overview of small RNA (miRNA) with counts more than 10 and transcriptome (mRNA) sequencing in rat ASTs exposed to two different shapes (flake or rod) of γ-Al2O3-NPs at 125 μg/mL for 72 h (n = 3 for each group)
Category | Data type | Control | Flake | Rod |
|---|---|---|---|---|
miRNA | Total raw reads (M) | 29.32 | 28.59 | 28.95 |
Total clean reads (M) | 27.11 | 26.13 | 26.49 | |
Clean reads Q20 (%) | 99.10 | 98.97 | 98.87 | |
Clean reads ratio (%) | 92.44 | 91.40 | 91.53 | |
Total-miRNAs | 659 | 671 | 647 | |
Known-miRNAs | 578 | 586 | 583 | |
Novel-miRNAs | 81 | 85 | 64 | |
mRNA | Total raw reads (M) | 21.80 | 21.78 | 21.77 |
Total clean reads (M) | 21.74 | 21.75 | 21.73 | |
Total clean bases (Gb) | 1.09 | 1.09 | 1.09 | |
Clean reads Q30 (%) | 90.61 | 91.15 | 91.23 | |
Clean reads ratio (%) | 99.73 | 99.87 | 99.78 |