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Table 1 Details of run statistics and data processing for library construction AG8025RR2, AG9045RR2 and near isogenic varieties

From: Analysis of transcriptomic differences between NK603 maize and near-isogenic varieties using RNA sequencing and RT-qPCR

Run statistics AG8025RR2 AG8025 conv AG9045RR2 AG9045 conv
Raw reads 95.5 M 91.7 M 71.1 M 73.1 M
Uniquely mapped reads 71.7 M 65.9 M 37.6 M 49 M
Repetitive sequences 5.4 M 5.2 M 3.1 M 3.6 M
Not aligned 5.0 M 6.1 M 20.8 M 2.8 M
Median insert size (nt) (from aligned paired end reads) 107 128 165 159