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Table 4 Description of reference genes and transgenes used for quantification of transcripts and their primer sequences

From: Levels of DNA methylation and transcript accumulation in leaves of transgenic maize varieties

Primer name

Gene product

Genbank accession no.

Primer sequence

MEP

Membrane protein PB1A10.07c

GRMZM2G018103_T01

F-GTACTCGGCAATGCTCTTGA

P-AACTTCGGTTGGTGAGAGCGGAAA

R-CAATCCTGACCCAGACAGATG

LUG

Leunig

GRMZM2G425377_T01

F-GGGACATAAGGGAGAAGAACAC

P-TTCCCTGTAGCACTGGATGATGCC

R-TCATGGCTTACTGAGGCAAC

Cry1A.105

Cry1A.105 protein

FV532179/FB707509

F-GACGTGGAGGAACAGAACAA

P-TTGTGCCTGAGTGGGAAGCTGAA

R-CCTCTACCTGGACAGACTCTAA

Cry2Ab2

Cry2Ab2 protein

FV532179/AR260587

F-GCGACTACCTGAAGAACTACAC

P-CAACACCTACCAGTCGGCCTTCAA

R-TGTCGTGAAGCCTCGTATTG

  1. F forward primer, R reverse primer, P probe